CDS
Accession Number | TCMCG009C18715 |
gbkey | CDS |
Protein Id | XP_030510030.1 |
Location | complement(join(8850102..8850803,8850979..8851048,8851141..8851206,8851872..8853592,8853973..8854185,8854398..8854574,8854698..8854847,8854931..8854992,8855300..8855367,8855730..8855929)) |
Gene | LOC115724823 |
GeneID | 115724823 |
Organism | Cannabis sativa |
Protein
Length | 1142aa |
Molecule type | protein |
Topology | linear |
Data_file_division | PLN |
dblink | BioProject:PRJNA560384 |
db_source | XM_030654170.1 |
Definition | telomere-associated protein RIF1 [Cannabis sativa] |
EGGNOG-MAPPER Annotation
COG_category | S |
Description | Rap1-interacting factor 1 N terminal |
KEGG_TC | - |
KEGG_Module | - |
KEGG_Reaction | - |
KEGG_rclass | - |
BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko03032 [VIEW IN KEGG] |
KEGG_ko |
ko:K11138
[VIEW IN KEGG] |
EC | - |
KEGG_Pathway |
ko04550
[VIEW IN KEGG] map04550 [VIEW IN KEGG] |
GOs | - |
Sequence
CDS: ATGTCGAGTTTCTCAGATCAGCTCCATGAAGTCAAGCTCTCCATTTCTTTGGGCACCAACAAGTCGTTTTCTTACTCAACCCTCTTGTATCTCCAAGAGCAGTCCGCTAACTGCTCTGCTTCAATTCAAACCCTCGCTGAAGCTACTCCAAGCTTAATCCCGTTAATGGCTGCCGATGTTCAAGATCAAGACGAAGAAATTGCAGGACAAGCATTGAAATGTTTGGGCTTCATGATGTATCATTCATCCCTCAGTGCCATAATTTCAGTGGCGGGAGTCAGTTTGATTATGGAGTCATTGGTTAAAATCATCACAACAACAAAAATAAAGTCATTATGCAATTTAGGAGTCTGGTGCATATCCATCCAACAACTTAATGAGTCAGTTCTTGTTCCTCATTTTGATTCTCTGTTGCAAGCAGTTGTCCATGGTGTTGAAAATCCTATGGGTTCCTTATCTACAACTTATGAGGCCATTCAGGCTATAATGAGGTTAGGAGTTCAATTACCTGAGAAGATGAGAGGATTCTCTCATGTCTGGGCTCCTTCAATATATAGAAGACTTCTCAGCTCTGACAAGAGGGAAAGAGATATGTCAGAACGGTGTCTACTAAAGATTAGATCTCTAATACTACCTCCTTCACTATATCTCTCAAAGGTACTTGTCAAAGATATGAAGCAAACATTGCTCACTAGGATGAAAGATCTACTAAACCATGGCAACAAGGTTCAGACAATTCGGGCATGGGGATGGTTTATCCAATTGTTGGGAGCCTACGCATTGAAGAACAGGAATTTAATTAATGATATGCTTAAAATCCCCGAGCTTACATTTTTGGACCAAGATCCTCAACTTCAGATTGCTTCCCAGGTTGCATGGGAAGGTTTAATAGATGCTCTTATTCATCCTGGAATATTACCTAATACAAGAAATGATGCTATAGAGGACGAATGCTTTCAACAAATGAGAGCATCTAAAATCCAAAATAATGAAATCCAGGCAAATGGTTTCTCAAAAAGTTTGAAATTGATTATGACACCTCTAATAGGCATCATGTCAAGCAAATGTGATGCATCTGTTTACACATCCTGTTTCAACACATGGTGTTATCTTTTACATAAGCTTGGTTCTGCTGTTAATTGTTCCTCGGTGAAGAAGCTTGTGTTGCAACCTGTATGTGAAGCAGTTTTTCAGAATGGCCCTGATCATAAGAGCATTTCGGTGTGGAATCTGTGCATAAATTTAATTGATGATTTAATTTTAGCAAAGTGTAGAGATGCAAACATTGAGCCAGCTGACTCGGAATGCAATCATTTATCAGCTACAACCTCCATTAATGGACCTTGGACTTCTGGAAAGTGCCCATGGAAACAGTATCCTATTAAATGGTTGCCGTGGGAGCTGAGTCAATTGGAATTTCATTTAAAGATTATAAACAGTCTCATCAATCAAGCATCGAAGATAACTGTTTCCCATGAGAACAGAACTTTGGCATACGATGCTTCCTTGAGGGTATTTAGATCTGTTGTGAAAGGAGTCCAAATAGATTTCAAAAAAGCATCCACTACTTATGATGATATTTTGCTGTCTTTGAACACAATATTAAGGTTTATGAAGTACTTATATGACGAAAATTCTGATGGCAGTGACAAAAATGACTTTCAAATTATTTCCCTTCAGCTCATAGAGATTGTTCTTGAAGAAATAAAGCCGTCTGTGTTGGGTTCTCCTCTTTACAAGGTACCATTAGATCTCAAGTATATTGAAAGCCAGAGCATTGCTGATGTTGATAAAAGTAGACATGCAAAAGCTTCAGGGATGTGCTCTCTAACTTATATGGATATGGTTTCACCGGCAGTATATTTAACTGTACTGTACTTCTGTGTTGTGACCCAATCAGATTTAAACACTTCCAATGCCAAATTTTTTCAGCAGGCAATGCAGAAGTATTTTAAAATTATTTTATCATCTTACGAACCACAGGACAATTTTGTCATTACTATTGACTTATTGTACAAGCACAAAGGCCCAAGCTGCCTAAGGATGTGGACAGCAATAGCGGAAAGTCTTAAAGACTGCATATGTGATGTGGAAAATCCATCCTTATTTAACGTGGAGTACAACAATGCATACTTTTCCACATGTAGTCTGTTATCCTACCCATTCATCATATGCTATTGCTACCAGAAAGATTTTATGTCAGCAAAGATTAGTGGCTCACTGGAAGAGTCTCTTGTTGCACCACAGAATAAGCTAGAGTTGGAACAAGCTGTTGGAGTTTGGAAGTCACTCTATGGCTCTCTTCGTACCTCGCAATTGGAGTGTTTCAAAGCTAACAAATTTCCTGAGGATCTTTGTGACACAATAGAGGAGATGCTTAACAATTACAATAGCATATTTGAGTCTGGTAATGATGTTGAATCGTGCCACATGGATTTGGATATTGACCTGGTCTCCTTCTATGCTGGTGCCATGACTTGTATTCTTGAAAGTTTCCAACCTTCAGAATTGATTCCAAATGAAAAAGATGGATGTAGCAGGCATCACAAGAAATTAAGTGGCATAAACAGTTTGTTGACAATGGCTATTAGATTTATGATGTTTTTGCAGACAAAGGTAGGAAAAGCCCCACCAATTATTCCTGTTATGATCTCGAGGATATACTCTGCATTGGCGCACTTTATTAGTTGTATTCACTTGAAACAAGATGTTCTTTCATTGGTTGAGATAATCTCCGTTCCATTGCTCCAATGGCTGGCAGAAATAGAGATGCAAGATGAAAGCACCAATGATCAATTTCAAGTCTTATGGTCAGAAACCCTGAAATGCCTACAGAGGAGTCAGCCACCACTAATTTTTGATTCTGCATTCCTTAAACTCCAATCACCTCTCCTTGAAAAAACTCTTGATCATTCTAATCCATCCATATCGGATCCAACAATCGGCTTTTGGAATTCAACATATGGTGATCAAATTAAGTTGCATTACCCTCAAAACTTGCTCCATGTCCTAGACAAACTATCCCGAAACGGAAAAGTAAATCTCCACAAGAAAAGTCAAGCATTTGTTGAGCAATGTGATTCTCGAGTTGGAGCAGTAGACACTGCTCCAGAAAAATACAGGGCGATTGCCACTCATAACATGTATTCCAAGAGGATAGAACTATTACAGGGTAATGTGGACCCTAAGAAAAATAATGAGAAGAACATGCCATCTTTAAATTTGAAAAGGAAGAGATTAGAGTTAACTGAGCATCAGAAGGAGGTAAGAAGGGCACAACAAGGCAGGGAAAGAGATTGCGGAGGACATGGGCTCGGTGGGATTCGTACTTACACAAACCTTGATTTTTCACAAGGGAATGAGGATTCACTTGATAGCCAAGAAATCTGGAATTCAGAATCCATATTGGACATGCCAAAAGATGCCTAG |
Protein: MSSFSDQLHEVKLSISLGTNKSFSYSTLLYLQEQSANCSASIQTLAEATPSLIPLMAADVQDQDEEIAGQALKCLGFMMYHSSLSAIISVAGVSLIMESLVKIITTTKIKSLCNLGVWCISIQQLNESVLVPHFDSLLQAVVHGVENPMGSLSTTYEAIQAIMRLGVQLPEKMRGFSHVWAPSIYRRLLSSDKRERDMSERCLLKIRSLILPPSLYLSKVLVKDMKQTLLTRMKDLLNHGNKVQTIRAWGWFIQLLGAYALKNRNLINDMLKIPELTFLDQDPQLQIASQVAWEGLIDALIHPGILPNTRNDAIEDECFQQMRASKIQNNEIQANGFSKSLKLIMTPLIGIMSSKCDASVYTSCFNTWCYLLHKLGSAVNCSSVKKLVLQPVCEAVFQNGPDHKSISVWNLCINLIDDLILAKCRDANIEPADSECNHLSATTSINGPWTSGKCPWKQYPIKWLPWELSQLEFHLKIINSLINQASKITVSHENRTLAYDASLRVFRSVVKGVQIDFKKASTTYDDILLSLNTILRFMKYLYDENSDGSDKNDFQIISLQLIEIVLEEIKPSVLGSPLYKVPLDLKYIESQSIADVDKSRHAKASGMCSLTYMDMVSPAVYLTVLYFCVVTQSDLNTSNAKFFQQAMQKYFKIILSSYEPQDNFVITIDLLYKHKGPSCLRMWTAIAESLKDCICDVENPSLFNVEYNNAYFSTCSLLSYPFIICYCYQKDFMSAKISGSLEESLVAPQNKLELEQAVGVWKSLYGSLRTSQLECFKANKFPEDLCDTIEEMLNNYNSIFESGNDVESCHMDLDIDLVSFYAGAMTCILESFQPSELIPNEKDGCSRHHKKLSGINSLLTMAIRFMMFLQTKVGKAPPIIPVMISRIYSALAHFISCIHLKQDVLSLVEIISVPLLQWLAEIEMQDESTNDQFQVLWSETLKCLQRSQPPLIFDSAFLKLQSPLLEKTLDHSNPSISDPTIGFWNSTYGDQIKLHYPQNLLHVLDKLSRNGKVNLHKKSQAFVEQCDSRVGAVDTAPEKYRAIATHNMYSKRIELLQGNVDPKKNNEKNMPSLNLKRKRLELTEHQKEVRRAQQGRERDCGGHGLGGIRTYTNLDFSQGNEDSLDSQEIWNSESILDMPKDA |